rs246106855 SNP Detail

Summary

• ID
  rs246106855
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:36076933 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ttgtttttg agacaggttt ttttgtgtag
  ctctggctgt cctggaactc actatgtaga ccagcctggt ctcaaactgt ccctctgcct
  atgcctccta agtgctggga ttaaagacat atgccactat taccctgcAA GTTTACTTAT
  K
  TGTATCGTGT GTGCATGCAC ATATGTATGC AGGTATGCTC ACTGCTAAGG GCATGTGCta
  tgtttatttt ctgtgtatgg tgttttgtct gcatgcatgt atatgtgcct tttgtgcctg
  gggcctgtgg aagtcagaag gtcacctaga                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325584129	CHEV_18_36103534	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246106855					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:36076933 () rs orientation: forward

Symbol	Name	Function Class
Gm56493	predicted gene, 56493	within coordinates
Rr536031	regulatory region 536031	1472 bp distal
Rr536032	regulatory region 536032	1922 bp distal
Rr536033	regulatory region 536033	670 bp distal
Tssr150585	transcription start site region 150585	1471 bp downstream