rs246230819 SNP Detail

Summary

• ID
  rs246230819
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:129227588 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATTC GCTGTAGGGT CCCAGCCCCC
  S
  CCCCTTTCTG TGCTGAGGAT CAAAG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321312025	CHEV_4_129011039	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246230819					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:129227588 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14889	CpG island 14889	811 bp proximal
Rbbp4	retinoblastoma binding protein 4, chromatin remodeling factor	within coordinates
Rr367701	regulatory region 367701	1564 bp upstream
Rr600200	regulatory region 600200	1526 bp proximal
Rr600201	regulatory region 600201	1565 bp proximal
Tssr39141	transcription start site region 39141	1798 bp upstream
Tssr43492	transcription start site region 43492	1448 bp downstream
Tssr43493	transcription start site region 43493	1502 bp downstream
Tssr43494	transcription start site region 43494	1529 bp downstream
Zbtb8os	zinc finger and BTB domain containing 8 opposite strand	1737 bp upstream