rs246243690 SNP Detail

Summary

• ID
  rs246243690
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:99240091 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACGCCCTTCG CTAGTTCTTA
  AATCAACAGG CGGGTGGAAG AAGCGCCCTG TTTCCTACGC GAGCAACTTT GCGGAGTCCT
  GGACGCCCAG TTTTGATCCT GGGTGTGTCC CACCTCCGAC TCTTCTCTGA AGCCCGGCCC
  TTGCGTGAAG ACCCGGGAGT ACGCCCCAGC TCCCCCCTCG GAAACCCACA GCCCTCCGCC
  S
  GGCCCGGCTT ACCCAGGCTG GCAAATGCTG GCCCCGCAGC TCACGGCTGA TGAACTCGCG
  CTCGTGCTCC AGGAATTCGA AGGCGGCCTC CAAGCGCCCC AGCTTCCCGC GGCGGTTCCG
  GCGCCACCAC ATCCAGAGCA GGGCGCCAAG CAGCAGCCAG GTGACGCTGA GCCCCAGGTA
  GCCCGCCAGG TAGACCGGTG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323135607	CHEV_9_99258457	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246243690					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:99240091 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22193	CpG island 22193	within coordinates
Esyt3	extended synaptotagmin-like protein 3	within coordinates
Rr206935	regulatory region 206935	within coordinates
Tssr91051	transcription start site region 91051	480 bp downstream