rs246283477 SNP Detail

Summary

• ID
  rs246283477
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:163309497 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACAGGATAT AAAATACATA
  TTTTAAATAG ATTATTATAT TTTAAAAATT ACTTAGTAGC CAGATGTGGT GGCTTTAATC
  TTAGTATATA TACCTTTAAT CCCAGCACTT AGGAAACCGA GGCAGGCAGG TAGATCTCTG
  TGAGTCTGAG ACCAGCCTGG TCTACATAGT GAGTTCCAGG CCAGCCAGGA CTGAATAGTA
  W
  GACCCTGCCT CAAAAGATTA AATTAAACTA GAAATTAAAA AAAATACTAA AATTAAAAGA
  AAAAGAAAGA GCTGTCTCTT AATTTACTAA GTGCCTAATA ACCCGAACTT GAGTCAGGCC
  AGTCAGGGTC AGGGCCAAAG CTTATCAGGT AATGTCATTA GCCAGCTCTG CTAGGGAGGA
  GGCATCAAAG CAGCTTCAAG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320603316	CHEV_2_163293313	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246283477					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:163309497 () rs orientation: forward

Symbol	Name	Function Class
Fitm2	fat storage-inducing transmembrane protein 2	mRNA-UTR
Rr569385	regulatory region 569385	405 bp distal