rs246307777 SNP Detail

Summary

• ID
  rs246307777
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:97023702 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGAGAAAG GGTGAGATCT
  CAGAGAGAGA AGAAAAGGAG GAGGAGAGAC CAAAAAACGT CTGGATTATA TAGGGAGGAG
  CCTCTGGGGG AAGGGCAGCC CAGCCCCTGG GCTGGAGAAG TCAAGGTTGG AGACAGAGTA
  TGATGTGTAG GGACTGAGGG GTGCTGGGAG AACCTGGAGG CCAGGTTTGC TTTGACATGT
  M
  AAATGTGCAC CTCAGTCCCT TGTTCTGGGT CCAGAAAGCA AACACTTTAA TCATGGAGTC
  ATTTGTGCTA AGATCTGGGG GCCTACTTAG GTCTGGGGCC CTGTTCCACC TTCCTCAGAG
  CTATCAATGG TGCTGAGCTA CTGAAGTCAC TGAAACCTGG ACGTCTGTCT TAACTTTCTG
  GGTAGCATGG TGTGACAAGC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323116094	CHEV_9_97042068	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246307777					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:97023702 () rs orientation: forward

Symbol	Name	Function Class
Gm57041	predicted gene, 57041	within coordinates
Rr685156	regulatory region 685156	688 bp distal
Tssr86631	transcription start site region 86631	510 bp downstream