rs246309760 SNP Detail

Summary

• ID
  rs246309760
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:34858085 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTTCTTGGT TTTTCATTTT CTGAccaggc
  gtgatggctc attcccataa tctaagtacc tgggaggctg aagcaggagg atttccacgt
  gttcaaggcc aacctgaaca ccctatttcc aaaaaaagaa agagagagag agagagagag
  R
  gagggagagg gagagagaga gagagagaga gagagagaga gagagagaga gaATAAAATC
  TCATTCTCCT CATTTCTCAG TTACGCTCCt gtcctggcta gttttatgtc tacttgacac
  aatctagagt catctgagag gagggaccct                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325374340	CHEV_17_34776056	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246309760					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:34858085 () rs orientation: forward

Symbol	Name	Function Class
Gm20461	predicted gene 20461	1735 bp downstream
Rr330940	regulatory region 330940	1285 bp distal
Rr339705	regulatory region 339705	1084 bp distal
Rr339706	regulatory region 339706	1915 bp proximal
Tssr144096	transcription start site region 144096	678 bp upstream
Tssr147629	transcription start site region 147629	1130 bp upstream
Tssr147630	transcription start site region 147630	1051 bp upstream
Tssr147631	transcription start site region 147631	1029 bp upstream