rs246320017 SNP Detail

Summary

• ID
  rs246320017
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:68788846 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACTCTGTCT GATGTGCCTT
  GGGACTTTAG ACGTTGCCAA AATACATATG GCCTAGAGAA TGCAAAAGGT CACAGGATTA
  TTTTTAGAGG GGACAGATAA GGCTCTGTTT TAAGCTTAAG GACTCTAATA AGACACTCTT
  TTTCTATTAT TTGTATGGTA GATATGTGGT CTTTTACTCT GTTTTGTCTC TCTGTGTCTA
  K
  GTCTCTGTCT GTCTTTCTGT CTTTTTGTGT CTTCCACTGT GTTTCTGTCT CCCCCTTCCA
  TTATATACTT CTAGGACAAG AAGTAAATTC TATTAGTAAT GAAATCAGAT GTGTCCCAGG
  GAGTGAAGAA CATCTCCTTT GCCAACCCAG AGGTCAAAGA GGATTTTTCT CTCTTTGTAA
  TGAGTTGAAT ATCCGTCTTG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322996724	CHEV_9_68729371	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246320017					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:68788846 () rs orientation: forward

Symbol	Name	Function Class
D9Mit158	DNA segment, Chr 9, Massachusetts Institute of Technology 158	614 bp proximal
Rora	RAR-related orphan receptor alpha	within coordinates
Tssr85829	transcription start site region 85829	1284 bp upstream