rs246345339 SNP Detail

Summary

• ID
  rs246345339
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr15:97239130 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ttatcgtag caaAGGCAGG CAAATTAGAA
  TGTGCAGTTC AGTAGCCTGA GGTGATGCAG AATGTGGTGG TGGAGAGATG TTGGACCACA
  GCATCTTACC TCAAGAGGTG CAGCTGGAGG CAGAGATGGG GAAGGAGCCA GGGACAAGAC
  R
  ACCCTCCAGA GGGGTCACTG GTGGTCGGTG CCTGGACCAG ATGCATCTTT TTTGAAGAGT
  TTGAAAAGGT GTACGCagcc gggtggtggt ggcgcacgcc tttaatccca gcacttggga
  ggcagagaca ggcggatttc tgagttcaag                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325076693	CHEV_15_97171680	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246345339					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:97239130 () rs orientation: forward

Symbol	Name	Function Class
Gm33325	predicted gene, 33325	within coordinates
Pced1b	PC-esterase domain containing 1B	Intron
Rr404591	regulatory region 404591	1154 bp upstream
Rr508792	regulatory region 508792	1863 bp distal
Rr508793	regulatory region 508793	1107 bp proximal
Rr508794	regulatory region 508794	1802 bp proximal