rs246383279 SNP Detail

Summary

• ID
  rs246383279
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:107697999 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAATGATAA ATCCTCAAGA
  ACTTGGAGCC CTGCAAAGCC CAACAGAAAA ATGCCCTCCC ACTCTAGAGG AAACCAAACT
  CCTTGCATGA TAGCACTGTG CAATCTCATC TGAATCAAAT GCTCTCAATG ATAGTGCTTG
  TACTCTATGA GACACGACTT TGCTCTCTTT TCTCTTCTAA TTACTGCAGT CAGACCTCAG
  Y
  ACAATGTGAT CCAGGAAGCA AAATGCCTAC TCCTTCAGTA CACAAAGGCT TACAAATCCT
  GTCAAATAGT TCAGATATCA AAAACACACT TGTAGAGTAC CTGCTGGTGA CATGTACAGA
  AGGAGTTAAT GCAAAGACAG ATAGATATGC AGCCCTCTTC TCTGACTCAT GACAGTATTT
  TGGTGCAGAC ATATGGATAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324518890	CHEV_13_108351579	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246383279					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:107697999 () rs orientation: forward

Symbol	Name	Function Class
Gm31920	predicted gene, 31920	within coordinates
Gm32004	predicted gene, 32004	within coordinates
Rr278138	regulatory region 278138	102 bp proximal