rs246423908 SNP Detail

Summary

• ID
  rs246423908
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:36727896 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCCATCCGC CCCTCACTCT
  CTGTTCAGGG CGGTGCTGCC TGACAATCCT GAGCTCTCCA CATTCCCCCT TGCTGTCTCC
  CTCCCTGTTT GACCTGACTC CACAGCAGCC AGTTGACTAG AGCTCTGGCA GCAAGGACAC
  AGCTGCAGCT ACGGCCCCCC AGCCCCGCCT ACTCAACCCT GCCACCCAGT GCTCTGTGGC
  R
  CGGCGTGATC TCTCGCGCGC GCCCCACCGC CCTGAGTGCC TGGAGCACAC TTGCTCTCCA
  ACCTGAGCAG AGTTGCTAGA AGACAGAACG CTGCTTCAGG CGCTGCTCTC TACTCTTGAC
  CCCCATGCTG ATATTCTGCT CTGCCAAGCC ACAGGCACAC TCCCGTAGCC ATCGCTTGCC
  GCCAAGCCAC GCCCCTCACG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324923472	CHEV_15_36657407	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246423908					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:36727896 () rs orientation: forward

Symbol	Name	Function Class
A830021M18Rik	RIKEN cDNA A830021M18 gene	within coordinates
Cpgi7034	CpG island 7034	within coordinates
Gm41297	predicted gene, 41297	within coordinates
Tssr131079	transcription start site region 131079	1327 bp downstream
Tssr131080	transcription start site region 131080	1273 bp downstream
Tssr131081	transcription start site region 131081	1251 bp downstream
Tssr131082	transcription start site region 131082	956 bp downstream
Tssr131083	transcription start site region 131083	780 bp downstream
Tssr131084	transcription start site region 131084	711 bp downstream