rs246496932 SNP Detail

Summary

• ID
  rs246496932
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:14928540 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CAAACTAAA CATGCCATTA TAGTCTCATC
  TATGTAAGTC TCAGCTTAAC TCATTTCTGT TCCCAAGCCT ACCTCTCata tatgtccata
  tatatatata tatatatata tatatatata tatatacaca cacacacaca cacacacaca
  Y
  acatatatat aCCATCACTG CTGACTCAAT TCATCCTGGG TCACAAACCC AAGACATCCT
  AGTATCATAT TCTCCTTTCC TGTCCAAACT GCCATAAACT GTACTATTTC TTTCTTAGGA
  TCTCTTCCCT TCCATCTATA ATTAGATAAT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321046993	CHEV_4_14855687	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246496932					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:14928540 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14053	CpG island 14053	1297 bp proximal
Gm11837	predicted gene 11837	1368 bp upstream
Gm68732	predicted gene, 68732	1187 bp downstream
Rr589248	regulatory region 589248	821 bp proximal
Rr589249	regulatory region 589249	1322 bp proximal
Rr589250	regulatory region 589250	1910 bp proximal
Tssr36545	transcription start site region 36545	1320 bp upstream