rs246584388 SNP Detail

Summary

• ID
  rs246584388
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:92599730 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGAGCCAAG ATGAGGGAGG
  CTAACTAACA CCTTCAGGTC TGGTCAGTGG TCTGCCTGTG TGCTCTGCAC CTGCAAAGAC
  TTCCCCGAGG GCTGGTACTT GAGGGCCATC CTCAGGGACA TGCCTGTTCT CCCCCACTCT
  GCCCATCTTC AGCCTCTCTC CAAGCGAGAT AAATTACTGG CATCCATAGG GGGGGGGGGG
  R
  AAGGGAGAAA GACCAGAAGG AGGGAGGAGA GAGTGGGGTG GGGTGGGGTG GGGTGGGGTG
  GGGGAGCCCT CTTTCCAGCT CTGGCAGCTC CCCCTGCACA TGTCAGATGA GTGTGTGATT
  TTAGAAAGCA AATCAGATCA TCTCTCTTAA GCTGGGGTCA TTACTCTCAC TTCTACAGAG
  ACTCATTTCA GAGTTAATTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320393993	CHEV_2_92609542	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246584388					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:92599730 () rs orientation: forward

Symbol	Name	Function Class
Rr560991	regulatory region 560991	927 bp distal