rs246629731 SNP Detail

Summary

• ID
  rs246629731
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:44130545 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTGT TTCTGCTTCT GTTTCTCCTA
  R
  TTATTTCTAC TCCGTCTCCT CTATC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322198947	CHEV_7_51736491	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246629731					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:44130545 () rs orientation: forward

Symbol	Name	Function Class
Rr646103	regulatory region 646103	1463 bp proximal
Tssr2228	transcription start site region 2228	1038 bp downstream
Tssr2229	transcription start site region 2229	763 bp downstream
Tssr2230	transcription start site region 2230	580 bp downstream
Tssr2231	transcription start site region 2231	453 bp downstream
Tssr2232	transcription start site region 2232	279 bp downstream
Tssr2233	transcription start site region 2233	234 bp downstream
Tssr2234	transcription start site region 2234	86 bp downstream
Tssr2235	transcription start site region 2235	546 bp upstream
Tssr66295	transcription start site region 66295	1886 bp downstream
Tssr66296	transcription start site region 66296	1715 bp downstream
Tssr66297	transcription start site region 66297	1691 bp downstream
Tssr66298	transcription start site region 66298	1636 bp downstream
Tssr66299	transcription start site region 66299	1616 bp downstream
Tssr66300	transcription start site region 66300	1593 bp downstream
Tssr66301	transcription start site region 66301	1577 bp downstream
Tssr66302	transcription start site region 66302	1536 bp downstream
Tssr66303	transcription start site region 66303	1527 bp downstream
Tssr66304	transcription start site region 66304	1522 bp downstream
Tssr66305	transcription start site region 66305	1483 bp downstream
Tssr66306	transcription start site region 66306	1429 bp downstream
Tssr66307	transcription start site region 66307	1380 bp downstream
Tssr66308	transcription start site region 66308	1363 bp downstream
Tssr66309	transcription start site region 66309	1313 bp downstream
Tssr66310	transcription start site region 66310	1244 bp downstream
Tssr66311	transcription start site region 66311	1221 bp downstream
Tssr66312	transcription start site region 66312	1202 bp downstream
Tssr66313	transcription start site region 66313	1192 bp downstream
Tssr66314	transcription start site region 66314	1174 bp downstream
Tssr66315	transcription start site region 66315	1167 bp downstream
Tssr66316	transcription start site region 66316	1102 bp downstream
Tssr66317	transcription start site region 66317	1086 bp downstream
Tssr66318	transcription start site region 66318	1045 bp downstream
Tssr66319	transcription start site region 66319	1017 bp downstream
Tssr66320	transcription start site region 66320	993 bp downstream
Tssr66321	transcription start site region 66321	969 bp downstream
Tssr66322	transcription start site region 66322	953 bp downstream
Tssr66323	transcription start site region 66323	915 bp downstream
Tssr66324	transcription start site region 66324	862 bp downstream
Tssr66325	transcription start site region 66325	821 bp downstream
Tssr66326	transcription start site region 66326	811 bp downstream
Tssr66327	transcription start site region 66327	791 bp downstream
Tssr66328	transcription start site region 66328	773 bp downstream
Tssr66329	transcription start site region 66329	734 bp downstream
Tssr66330	transcription start site region 66330	721 bp downstream
Tssr66331	transcription start site region 66331	707 bp downstream
Tssr66332	transcription start site region 66332	674 bp downstream
Tssr66333	transcription start site region 66333	639 bp downstream
Tssr66334	transcription start site region 66334	633 bp downstream
Tssr66335	transcription start site region 66335	622 bp downstream
Tssr66336	transcription start site region 66336	608 bp downstream
Tssr66337	transcription start site region 66337	592 bp downstream
Tssr66338	transcription start site region 66338	508 bp downstream
Tssr66339	transcription start site region 66339	476 bp downstream
Tssr66340	transcription start site region 66340	409 bp downstream
Tssr66341	transcription start site region 66341	360 bp downstream
Tssr66342	transcription start site region 66342	331 bp downstream
Tssr66343	transcription start site region 66343	305 bp downstream
Tssr66344	transcription start site region 66344	148 bp downstream
Tssr66345	transcription start site region 66345	111 bp downstream
Tssr66346	transcription start site region 66346	39 bp downstream
Tssr66347	transcription start site region 66347	21 bp downstream
Tssr66348	transcription start site region 66348	3 bp upstream
Tssr66349	transcription start site region 66349	27 bp upstream
Tssr66350	transcription start site region 66350	55 bp upstream
Tssr66351	transcription start site region 66351	63 bp upstream
Tssr66352	transcription start site region 66352	99 bp upstream
Tssr66353	transcription start site region 66353	173 bp upstream
Tssr66354	transcription start site region 66354	187 bp upstream
Tssr66355	transcription start site region 66355	214 bp upstream
Tssr66356	transcription start site region 66356	231 bp upstream
Tssr66357	transcription start site region 66357	245 bp upstream
Tssr66358	transcription start site region 66358	257 bp upstream
Tssr66359	transcription start site region 66359	283 bp upstream
Tssr66360	transcription start site region 66360	295 bp upstream
Tssr66361	transcription start site region 66361	321 bp upstream
Tssr66362	transcription start site region 66362	353 bp upstream
Tssr66363	transcription start site region 66363	370 bp upstream
Tssr66364	transcription start site region 66364	403 bp upstream
Tssr66365	transcription start site region 66365	423 bp upstream
Tssr66366	transcription start site region 66366	443 bp upstream
Tssr66367	transcription start site region 66367	471 bp upstream
Tssr66368	transcription start site region 66368	493 bp upstream
Tssr66369	transcription start site region 66369	527 bp upstream
Tssr66370	transcription start site region 66370	569 bp upstream
Tssr66371	transcription start site region 66371	994 bp upstream
Tssr66372	transcription start site region 66372	1157 bp upstream
Tssr66373	transcription start site region 66373	1447 bp upstream
Tssr66374	transcription start site region 66374	1505 bp upstream
Tssr66375	transcription start site region 66375	1516 bp upstream
Tssr66376	transcription start site region 66376	1529 bp upstream
Tssr66377	transcription start site region 66377	1568 bp upstream
Tssr66378	transcription start site region 66378	1590 bp upstream
Tssr66379	transcription start site region 66379	1602 bp upstream
Tssr66380	transcription start site region 66380	1635 bp upstream
Tssr66381	transcription start site region 66381	1654 bp upstream
Tssr66382	transcription start site region 66382	1678 bp upstream
Tssr66383	transcription start site region 66383	1788 bp upstream
Tssr66384	transcription start site region 66384	1886 bp upstream
Tssr72202	transcription start site region 72202	1313 bp upstream
Tssr72203	transcription start site region 72203	933 bp upstream
Tssr72204	transcription start site region 72204	333 bp upstream