rs246639533 SNP Detail

Summary

• ID
  rs246639533
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:61860997 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAAACCTAT GCTGACTGAC
  AGCCTGTTCT CTGCAAGCCA AAGCTACCAC CACCATAGCC CAAGCTGGGA GGGGCCCTGA
  AATAAAACAG AACACCGCCC ACCTCCTATC TACATTCGGC TGATCTCTCC AGAGACCAGA
  CACAGGAGCA CCTTGGGCAT CCAGCAGGAC CTGGTCATAC CTCTTCTCCA CCAGTCTTCC
  Y
  GTGTTCCCTC TGTTCATTCT CTGGCTCTGG TCTGTCCATC ACGGGCTTGG TTCCCCCCAG
  AGGATCTTCA ACGCTCTTGA GACCCACCCC TAAATAAAAG CAAGGGAACA AAGGAGCCAC
  TCTGAAAAAG TGATGCTACC CTTGGAAAGA ATGTAGACCT GTGTAGAGTG TGATTCAATT
  AGTCTGCTCC TATAGAGTGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323330446	CHEV_10_61487966	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246639533					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:61860997 () rs orientation: forward

Symbol	Name	Function Class
Gm47919	predicted gene, 47919	within coordinates
Gm66887	predicted gene, 66887	1736 bp downstream
Rr432503	regulatory region 432503	546 bp distal