rs246639823 SNP Detail

Summary

• ID
  rs246639823
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:124151985 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTCTCTCT CCCCCGTCTC
  TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TATCTATCTA TCTATATATA TATATATATA
  TATATATATA TAATTTTTTC CTTTTCCAAA CTCACTCTGA AGATTATGTT GGCCTTGAGC
  ACAGATCTGC CTGCCTCTGG CTCCCAAATG CTGTAATTAA AGATATGTAC CACCACTGCC
  Y
  GGCTAAGAAG AAATTTCTTA AAATGCCATA CTCAAGCTAG GCATAAAGGG GTGGGGTGTG
  CAGCCCATTT TTCCCCCAGG CCTCCCACTG TGACCATGTG ACTCCCCTTG ACCATGGAGC
  AGGGAAACCG GACCCCACTC AAAGGCAACT TCACCAGCAG AGGGTGGTTT CAGCTAGAGA
  TGGGTGGGAG AGAGCAAGTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322855347	CHEV_8_125949146	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246639823					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:124151985 () rs orientation: forward

Symbol	Name	Function Class
Mela	melanoma antigen	627 bp downstream
Rr183291	regulatory region 183291	731 bp distal
Tssr83353	transcription start site region 83353	1491 bp downstream