rs246666982 SNP Detail

Summary

• ID
  rs246666982
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:141154816 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTGACACTG GCATCTTCTA
  GAAATCAGAC AACTCCTTGG AATTTGTATA GATTTAAATA TACAGACAGA CCTTCCATGG
  AGTAAAACTG AATCTTAGAT TTAGCATGTG CAAGAACCAC TACCCAAATG TATATGTGTA
  AAATATGTGT ACTGTTCTTT GTTGCATATT TAAAGTATTT TCAAAGTGAA TTTTTGCTTT
  W
  TAATTTTGAT GATTTTGTAT TTTAATCTAA GTGTAGTGTT TGCACCAATG AAACCTGTGG
  GTGTGCTTGC TGAAATTACA AGTGACACAC GGGATTCATT ATGTCTATAA CATATATATG
  TACGCAGAAG CCATTCCAAA TAAGTTCTGA ATGACTTTGG ACAGTCTGCA GTTTGGTGTG
  ACGATGTGGA TAAATAAAAG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320992234	CHEV_3_141112019	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246666982					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:141154816 () rs orientation: forward

Symbol	Name	Function Class
Gm66152	predicted gene, 66152	within coordinates
Tssr32030	transcription start site region 32030	140 bp upstream