rs246690540 SNP Detail

Summary

• ID
  rs246690540
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:119184194 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGCCTTTCT CTCAGCCTTT
  GTGCCATCAA GATGGCTCAG TGGGTAAGGA CCCTGGCTGG CAAGCCGTAT GATCCGAGTT
  TGATCCCCAG AATTCCCATG GTAGAAGGGA GACCCTATTT CTTCACATTG TTTGGCAGCT
  ACACACATGA CACCATGCAC ACCATATCAA TGATCAATCA ATCAATCGAT CAGTGTAAAG
  R
  CAAAAACTGA AATAAACCGG ACTCTGCTTT ATATTGGCTG GTCCTGAGAT TCTTTTCTGT
  GTTAGAGCCA GGAGTTCCAG TTGGCCGGAG TTGAAGTAAC TAAGAGGTGA GGGGGAGCTG
  CCCAGGCTAC GGTGGATGTT GGGGTGAAGC TGTGCTTTCT TCCTTGTACC CCTCGATAGC
  ACATCTCTAC GGACATGGCG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323218999	CHEV_9_119264246	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246690540					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:119184194 () rs orientation: forward

Symbol	Name	Function Class
Rr688472	regulatory region 688472	748 bp proximal