rs246710560 SNP Detail

Summary

• ID
  rs246710560
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:68257362 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGCATGTCT ACATGTGGAT
  ATAAGAGGAC AACATTGGAT ATTAGTCTGT AGAAGACATA CTTTTTGTTT GTTTTTTTTT
  TGTGTTGCTT TGTTTTGTTT TGTTGTGATA CAGGATCTGT TATTGACTTT GGACCATTGT
  GATTAGGCTA GTCTAGCTAA CCAATTAATC CCTGGGTCTC CAATGTTGGG AATACTATTA
  Y
  ATATAACCAG GCCTGGCTTT TTCATGTGGA TCAGAGGACT GAGTCCACTC TGGTTTTTCA
  CTGTTGTGTA GCAATCACTT TAGTAACAGG GTCTTTTCTC TGGACTGATT TAAAATATGT
  ACTCAAATTT CCCATTGAAC CTCATAAACC CTCCGACATA TATGACAATT TTTATGCCCA
  TTTAAAGGAA AAGAGGCTGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321154315	CHEV_4_68000159	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246710560					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:68257362 () rs orientation: forward

Symbol	Name	Function Class
Rr376643	regulatory region 376643	1945 bp upstream