rs246716615 SNP Detail

Summary

• ID
  rs246716615
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:98621005 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    agcccaaca tcttcccagc aatggtgtgg
  ggaatgagca gtcaaaactt cctgtgtccc acctggaagt gtggcctaag cttcgagcag
  atgtggatct ccatccttaA ACCAACAAAC ACTATCATGT TAGCTACAAC ATTTTCCAAG
  Y
  TTTCATCTTG ATGTCATATT TTATACTTTC TTGAGGTGTT TTATGGTTTA AAATGCACGA
  TAGAAACTAT TTAAATGTCT TACACTGATT CACTATTTAC TAGTGATCTG AACTGACGAT
  CACTGACCAC GACTAAGTTC GGAGGTTATC                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319867640	CHEV_1_100589857	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246716615					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:98621005 () rs orientation: forward

Symbol	Name	Function Class
Tssr8238	transcription start site region 8238	196 bp upstream