rs246784403 SNP Detail

Summary

• ID
  rs246784403
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:95720398 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGGCTTGT GACCAAGGCC
  ATGGGGAGGC AGGCAGCAAG TGGCAGCCTC TAACAAGTAT TCATTTGGTC AAGGGTCTCG
  CTCCCATCCT GTTCTCAAAC CACTTGGTGT TAAAGTCACT CTGAGGGCTA GAAGTGGTGG
  CACACATCTG TGATCTCTGT ACTTGAGACA GAGGCAGGAA GATAGCAAGT TCTCGCTCCC
  R
  TTAACCCTGT ATCCCCTCCC CGTTCCCCTG ATACTGACGT ATAGCTAATG GTGGGGTGGG
  GTGTTATTGG GGACCCTAGG AAAGGGGTAT CGCACATAGC TGGTCCTCTA AGAAGACACA
  GACAGCCCAC TTGCCTGGAC TACATTGCAA GACCTTCTTC CCTCAAAGGG AAAAAAAAAG
  TCACTGGGAG ATTTCATGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322809820	CHEV_8_97517670	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246784403					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:95720398 () rs orientation: forward

Symbol	Name	Function Class
Adgrg1	adhesion G protein-coupled receptor G1	within coordinates
Rr668146	regulatory region 668146	1800 bp distal
Tssr78941	transcription start site region 78941	1068 bp downstream
Tssr78942	transcription start site region 78942	896 bp downstream
Tssr78943	transcription start site region 78943	833 bp downstream
Tssr78944	transcription start site region 78944	468 bp upstream
Tssr78945	transcription start site region 78945	595 bp upstream
Tssr78946	transcription start site region 78946	623 bp upstream
Tssr78947	transcription start site region 78947	923 bp upstream
Tssr78948	transcription start site region 78948	975 bp upstream
Tssr78949	transcription start site region 78949	1023 bp upstream
Tssr78950	transcription start site region 78950	1070 bp upstream
Tssr78951	transcription start site region 78951	1821 bp upstream
Tssr78952	transcription start site region 78952	1913 bp upstream
Tssr78953	transcription start site region 78953	1934 bp upstream
Tssr78954	transcription start site region 78954	1980 bp upstream