rs246786859 SNP Detail

Summary

• ID
  rs246786859
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:109905407 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTTTATTT GCTTTGGTGT
  TGGGGATGGG AACCAGGGTG TGGTACATGC TAAGCACATG CTGTGCTACT AAGCAGCATC
  CCTGACCTTT GGAATCTTCA TTTTTAACAA GAGGATTCGT TTATTTCCTT TTCGGTAGCA
  CTTTTAAACT TCAGTTTAAA ATGTAAGTTG TTGCTAAGGT AAAGTTTGCA TTTGGAATCT
  S
  TGTAGACCAA ACCCAGTGCC CCATGCTCTA CAAATGAGCA AACCTCTTTG GCCCCATGCA
  TTATTTTATG TCATAGGTCA AAGCCCAGCC TAATTAAGGG ATTAGTTCAA GGTCACACAA
  TTAATCAAAA GATGGCAACT TGCTGCCAGC CCTTCTTGAT GGCAGCTGCT CCAAGCAGGC
  TACTGGGTCG ACTGTGTCAT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322395858	CHEV_7_117449714	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246786859					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:109905407 () rs orientation: forward

Symbol	Name	Function Class
Rr159222	regulatory region 159222	406 bp distal
Rr159223	regulatory region 159223	7 bp distal
Rr159224	regulatory region 159224	594 bp proximal
Sbf2	SET binding factor 2	1813 bp downstream