rs246790330 SNP Detail

Summary

• ID
  rs246790330
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:7334734 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TACAGAGCA TCTACTTAAT TATTTATAGC
  TCATAAGGAT TAGTTTGAAC ATCTACATCT TTGCATCATA TGATAAAAGA GTTCTCGGGC
  TCATTCAGGG ACAGAGCTGT CAGTGATAAG TAGAATTTTT GGTCCTGTTT TGTGGATATT
  Y
  GTTGTTTCTT CTTCCCCTGT TTCATTATCT TGGTGATCCT TAACTGGGTG AGGGGATAAA
  TTAAGTGGAT GGCTTTGAAG AGAGATGACA AGAAAGGGCA GGAGACCTAG TCTCCCAAGA
  CAGCCTTACA AATCACAAAA CAGAAGTCAT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325887852	CHEV_X_7045621	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246790330					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:7334734 () rs orientation: forward

Symbol	Name	Function Class
DXImx26	DNA segment, Chr X, Immunex 26	494 bp proximal
DXImx27	DNA segment, Chr X, Immunex 27	137 bp proximal
Gm32829	predicted gene, 32829	within coordinates