rs246790547 SNP Detail

Summary

• ID
  rs246790547
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:74004846 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTTTGGATT TTTTTTTCTT TACAGCTTTA
  ATGTGatata atttatttga aatttaattt taataGAACA GGTTTTCAGA AATAGGTAAG
  TATATAAATA AATAGGCAGA GCCTTGCAAG TGATTCAATT TAGCAGGATA GCATGGGGAT
  R
  TTTTCTAGTG ATTCTGTTTC CTGCTAAATG GTGGAACTCA TGGAGCAAGG AACTATCGTT
  CTCTCTTAGG ATGTAGAAGA GTAGTAAGCA GCCATGCCTA CTGAGGGACA AGGGGCACAG
  GCTTTCTCAT TCTCTTCCCC ACCCCCACCC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325896846	CHEV_X_72206579	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246790547					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:74004846 () rs orientation: forward

Symbol	Name	Function Class
Gm15363	predicted gene 15363	1593 bp downstream
Gm62199	predicted gene, 62199	1416 bp downstream
Rr692060	regulatory region 692060	1846 bp distal
Rr692061	regulatory region 692061	1839 bp proximal