rs246795293 SNP Detail

Summary

• ID
  rs246795293
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:72836203 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    acttcataa ctataatttt gctaccgtta
  tgaatcataa tgtaactgtc tgatatgcag gatatctgat aggtaagcct aaaagggtca
  tgacccacag gttgagaact tctgAGATAA AGGATGCTGA TAGATAGACA TACACCAACG
  R
  ATGCTTTCAC ACAGAGGCAT GTGCACATAC TTCTCTATTC TCTTACACAC TTATTTGCAC
  ACATCCACTT TCCGTTCGGC TAAAATAAGC AAGCTCTTCT CACATCTTTC CTTTTCATAA
  GCCAGTTTCC AGCAAGCAGG ACAGAGCGCA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322258981	CHEV_7_80331341	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246795293					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:72836203 () rs orientation: forward

Symbol	Name	Function Class
Gm20083	predicted gene, 20083	within coordinates
Gm28746	predicted gene 28746	1062 bp upstream
Rr648887	regulatory region 648887	1073 bp distal
Rr648888	regulatory region 648888	840 bp distal
Rr648889	regulatory region 648889	269 bp distal
Rr648890	regulatory region 648890	55 bp proximal
Tssr67187	transcription start site region 67187	680 bp downstream
Tssr67188	transcription start site region 67188	646 bp downstream