rs246843156 SNP Detail

Summary

• ID
  rs246843156
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:10990257 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAAGAGTTG AGGCCTATTT
  TCTTCCATGG GTTCCCAAGC TAAGTGAAAT CTAAATTGTG CTAATAGATC CTATAACTGA
  TACCACCACC ATAGTTTTAA GTCAGATAAA GAAATACTCA ATTAAGTGTT CATTTAATTA
  GAACTCTAAG CTATGTCCTT CTTCATAGTG TTAGTTTGGT TCAGTATTTT CAAGTATTCT
  R
  TTCAGTAAAG ACTTGGGATT TTATTCAGCT CAGATGAGTG TTTCTTCAAG ACCTTCTTTT
  TCCCCTTTAG CGTAGAACAG TGATGAGGAA CATATAGACT GTGAAAGTGT CTATGCTTTA
  TTTTTTTATT AGATATTATC TTTATATACA TTTCAAATTT CAAATGCTAT CCCGAAAGTT
  CCCTATACCC TCCCCCCCTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324260877	CHEV_13_10939467	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246843156					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:10990257 () rs orientation: forward

Symbol	Name	Function Class
Rr270342	regulatory region 270342	1657 bp distal
Rr270346	regulatory region 270346	1744 bp proximal
Rr278201	regulatory region 278201	1819 bp proximal