rs246874498 SNP Detail

Summary

• ID
  rs246874498
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:135659264 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AAGCAAGCT GTTTTGTTGA ATAATGCAAG
  GATAACATGA ATAGACTTCC CTTCAAGGCT TTCTTCCTGG CACCGTGACT GTAAATAGCA
  GACCGTGAAC ATGCATCAGA AGAGTAAGCA GAGAACACAG GATTAACACT Gggggggggg
  R
  ggggggctcc tccagggtat aaaggcgctt gctgccaagc ttgctgatct aagtttgatc
  ccgaagacct acaagggatg aaaCGTGATG AAACCATTTC TAGATTTAGC TCAAGAATAA
  ACTCTTAGAA ACAAGAGCTG TGGTTTGTGC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321697448	CHEV_5_136106280	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246874498					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:135659264 () rs orientation: forward

Symbol	Name	Function Class
Gm72236	predicted gene, 72236	1991 bp downstream
Rr399417	regulatory region 399417	1462 bp downstream
Rr622386	regulatory region 622386	1630 bp distal
Rr622387	regulatory region 622387	1024 bp distal
Rr622388	regulatory region 622388	152 bp proximal
Rr622389	regulatory region 622389	388 bp proximal
Rr622390	regulatory region 622390	1806 bp proximal