rs246896798 SNP Detail

Summary

• ID
  rs246896798
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:31182955 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTCCCACAA GAAAGGTGAG
  TATCTTCTTG TGGTGGACTT GATGCTGAAT GTGTTGGTAC AGAAGTGTCA GCATTTTACC
  CCATGGTGTT AGCATCCACT GATACTGTTT GAAAAAAACC TTTGCTTTGT TCTTTTGATA
  TGAAAGGGTC TTGCTGTATA GCCTGGGTAA GATCCAAACA CAGGACTATG CTCAGGTCTG
  K
  GTCTCCTGAG TATTCCCAGA ACATTGTGCC CAGCTACATT TTAGGTGTGT TTGTTTGTTT
  GTCTTGTCTT GTTTTGAACT AGAGTGATGT GTCGCCATGT TGCCCTGGCT CACCTTGTGC
  TCCAAATCTG CCCCGCCCTC CTGAGTGGAT TACAGGAATA TGCCACCGTG ATTGGCCAAA
  ACTTTGACCA TGACTATGGC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322889685	CHEV_9_31079244	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246896798					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:31182955 () rs orientation: forward

Symbol	Name	Function Class
Gm51733	predicted gene, 51733	654 bp upstream
Gm69959	predicted gene, 69959	within coordinates
Rr194404	regulatory region 194404	955 bp distal
Rr208622	regulatory region 208622	within coordinates