rs246908426 SNP Detail

Summary

• ID
  rs246908426
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:25110535 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGCACTCGG GAGGCAGAAG
  CAGGTGGATA CATCTGAATT CAGTGCCAAC CTGGTCTACA GAGCAAGTTC CAGGACAGCC
  AGGGCTACAC AGAAAGACCT TGTGTGTCTG CAAGTGTAGC TGGCAACATA CACACAAGTG
  TACACACAGC CCAGCCAAGA TCCACTTCCC AGACCTTCCC AACCTCTCCT GGAAAAGTCA
  M
  AGATTTTCTC AGAAAAACAA ACAAACAAAA AATAGAGGCA TGGCTGTAAT TCAGTGACAC
  ACTGCTTGGT TAGCATGCAT GGGCACCCCC CTCCCCCATA CACACACACT AGCAACAACA
  AGAAAAAACC AACACTATCA TACCTTGGCA TATGAGTCAT AGAAGTGAAT CATTTTGAAC
  TTAGAAACCT GAGCCCTTAG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322121669	CHEV_7_26196129	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246908426					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:25110535 () rs orientation: forward

Symbol	Name	Function Class
4732471J01Rik	RIKEN cDNA 4732471J01 gene	within coordinates
Cxcl17	C-X-C motif chemokine ligand 17	within coordinates
Tssr2143	transcription start site region 2143	1687 bp downstream
Tssr2144	transcription start site region 2144	1837 bp downstream
Tssr2145	transcription start site region 2145	1855 bp downstream
Tssr2146	transcription start site region 2146	1873 bp downstream
Tssr2147	transcription start site region 2147	1916 bp downstream
Tssr71243	transcription start site region 71243	1697 bp downstream
Tssr71244	transcription start site region 71244	1722 bp downstream
Tssr71245	transcription start site region 71245	1735 bp downstream
Tssr71246	transcription start site region 71246	1747 bp downstream
Tssr71247	transcription start site region 71247	1792 bp downstream