rs246952072 SNP Detail

Summary

• ID
  rs246952072
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:189084434 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GGCTCCAGC ACTGGAAGGC TTCCGTCTCC
  TACAGATTGG ATTTTTTTAC TCTGAGCCAT TGAGAGCGCA CTGTAGTCGC AATGCACGCA
  AAGGGAATCC ATTCACCCCA CAGAGGGAAT CAGAAGACAG AAACAGGTTT GACCCTTCCA
  R
  CCCGTGCAAT ACATGCCTCT AAAAGACAGA AGACCTCCAT GAGTGTTCCG CCATCTCTAA
  ACAGCAGGGA GCCAGGATTT CTTTCGTGAG TGTGGTGGGG TGGGGCTGAT ATGGATAGTT
  ATTAAACTAA GTTAAAATGT CCAGGTCTGA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320190779	CHEV_1_191176116	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246952072					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:189084434 () rs orientation: forward

Symbol	Name	Function Class
Kcnk2	potassium channel, subfamily K, member 2	Intron
Rr425789	regulatory region 425789	1721 bp proximal