rs246952401 SNP Detail

Summary

• ID
  rs246952401
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:36066811 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAATCTTCCA CACTGCAACC AGATGCCTCA TCACTGTCAC
  TCCACCTCCT CAGGAATGGT GACCTACTCC GAGACCTGCC CCTCCCCCTC AAATGCTGAT
  Y
  ATGGTAATGG GGCAAGAGGG GCACCGGGAG CTTTTGTGCC TGTGACTTCA TTAACAGAAA
  TGTCAGTCCT GAGAGTCAAA ACTTATTACC TCTTTAGTC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324315035	CHEV_13_35974697	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246952401					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:36066811 () rs orientation: forward

Symbol	Name	Function Class
Rr271493	regulatory region 271493	590 bp proximal
Rr271494	regulatory region 271494	1990 bp proximal
Rr275770	regulatory region 275770	1610 bp distal
Rr283230	regulatory region 283230	1591 bp proximal