rs246981644 SNP Detail

Summary

• ID
  rs246981644
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:138904652 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TAAATATTT TGGGATTGCT TTTAAAGATC
  TTGAATAACT TAATTTTTTC CTATAAGTCA AATAGTATTT CTGTAATAGT TGTAAAGCAA
  CTAATGAACT TAATTTATTT GGATTAATAA ACTGTTATCA CATTTActat ctatctatct
  R
  tctatctatc tatctatcta cctTacacac acacacacac acacacacac acacacacac
  acacacaTTT TATTACCACA GAGGACGTAA ACACTAAGTT TTGGTGCTTA TTGTTTTGCT
  GACACACGTG GCTTCATGAT GAATACCTGC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320001806	CHEV_1_140873491	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246981644					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:138904652 () rs orientation: forward

Symbol	Name	Function Class
4930596I21Rik	RIKEN cDNA 4930596I21 gene	743 bp upstream
Dennd1b	DENN domain containing 1B	within coordinates
Gm71084	predicted gene, 71084	within coordinates
Rr396346	regulatory region 396346	596 bp downstream