rs247026162 SNP Detail

Summary

• ID
  rs247026162
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:15783698 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGACTTTTG AGAATGCTGT
  CCATCACCTT CCTGTCAGAG GGTGAAAGAA GACACCAACC ACCATCACAA GTCCCTGGAC
  CTGTGGAGAG ATGTCTACCT AATGCTGAGA GAAGAACAAG ATCAAATTCC TCACTCACTT
  CAGGGCTGGG CAAACGAGTC AGTGGCAGGG TACTTGTCCA GCATGCATTA GGGTTTGAGT
  Y
  ACATCCCTAG TGCTAGAAAG GAAAGATGGG GGGAAAAGAA AACGGGAAAA AAAGGAAAAC
  ACAAATCCTA GCTTGAGAAA AGTCCCATTT GAGCCCTGTC TGATCAAGTT CAAATCAACA
  CAAGGGAAAA GCCTGTATTC ACCCACCTGC ATGCCTCCAT TATTCTTTTT AAGATATGTA
  AATGCTAGAA ATTAATTGCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325723799	CHEV_19_15880824	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247026162					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:15783698 () rs orientation: forward

Symbol	Name	Function Class
Gm50348	predicted gene, 50348	within coordinates
Rr406864	regulatory region 406864	1666 bp distal