rs247053799 SNP Detail

Summary

• ID
  rs247053799
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:45656096 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAGGGCTGG CAGGATGGCT
  CAGTGGGTAG GGCACACTTG GTGCCAGATC TGATGACCTG AATTCAGTCC CCCAGATCCA
  TGTGATCCCT GCCAAGGTGG GTTGTTCTCT ACCCTCCACA CGTCCCCACC CCCCGCCTCC
  ACACAAATGA AATAAATGTG ATTTTGCCTT TAATCCCAGC ACTTGGGGGG CAGAGGCACT
  C
  GGGAGGCAGA GGCAGGTGGA TTTCTGAGTT CGAGGTCAGC CTGGTCTACA GAGTGAGTTC
  CAGGACAGCC AGGGCTACAA CAGAGAAACC CTGTCTCGAA AAAAAAAAAA GAAAGAAAAG
  AAAAGAAAAG AAAAGAAAAA GAAAAAAATT CATTTGTGCC AAAAAGATAA AGCAAAGGCA
  ATGAAGTAGG TTTTCTTCCT                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.RIII-H2 H2-T18/(71NS)SnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C58/J	PL/J	QSi3/Ianm
ss388481849	MGP_WTSI_13_45597989	EVA_MGPV3	EVA_MGPV3	f	SNP	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	B10.RIII-H2 H2-T18/(71NS)SnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C58/J	PL/J	QSi3/Ianm
rs247053799					SNP	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss388481849	MGP_WTSI_13_45597989	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:45656096 () rs orientation: forward

Symbol	Name	Function Class
Rr283740	regulatory region 283740	within coordinates