rs247058013 SNP Detail

Summary

• ID
  rs247058013
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:70896282 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTATGGAAG GCCTCCTTCC
  AGTCCATTGC AGTATCTAAA GGCCACTATA CTATACTCTG TCATACCTAA AGTCCAGCAT
  ACCATATGTG GGAATACTTA CTTCTCATAA GAGAAAAGAA AGCTTTTGAA TAGAGCTATA
  GCCAAATATC CTCCCTCATT CAGGTTTGCC GTCGTGGTGT CACAAAAGAA TCCCTTAACC
  Y
  GAGACCCTGA GAAACAGCTT CTGTACTCAA GGGCACCAGA CCTGCAAACC AAACTAAAGC
  AAAACAAGAA GACATTCTAA CACCATCCCC AAGTGTTCCT GAAGGCAATG CTGAAATAAC
  TGTGGAAATG CTGAGCAGGA CCAGTTATGT TACGATATTC ATGGGAACTA GAGTCTAGTA
  AAGTGGTGCA CTCACTGTTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324416626	CHEV_13_70887041	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247058013					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:70896282 () rs orientation: forward

Symbol	Name	Function Class
Adamts16	ADAM metallopeptidase with thrombospondin type 1 motif 16	within coordinates
Rr284828	regulatory region 284828	1139 bp distal
Tssr123156	transcription start site region 123156	1919 bp downstream