rs247083365 SNP Detail

Summary

• ID
  rs247083365
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:83108642 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATTGGACTT GCAAACTTTA
  TATGCCCCAG TACAGAGGAA TGCCAGGGCC AAAAAGGGGG AGTGGGTGGG TAGGGGATTG
  GGGGGGTGGG TATGGGGGAC CTTTGGGATA GCATTGAAAA TGTAAACGAG GAAAATACCT
  AATAAATAAA TAAATAAATA AATAAATAAA TAAATAAATA AATAAATAGA AATATTCTCT
  R
  ATAAGAAAAA AAAATTATTG AAGGCTTTGC TTCTCAACAA AATCCTGTGT GTTCTCACTA
  ATATCCTAGA GTGGCTACTA TTGCTGTGAT AGATTCCATA TGCAAGAGCA ACTTGGATTG
  GAAAGGGTTT AATTCAGCCC TCAGTCTATA ATACATTATG AAGAAAATTT AGGGCAGGAA
  CTAAAGAGAG GCTATGAAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.RIII-H2 H2-T18/(71NS)SnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	FVB/NJ	JF1/MsJ	MOLF/EiJ	NZB/BlNJ	NZO/HlLtJ	PWK/PhJ
ss375352579	MGP_WTSI_8_84905912	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	B10.RIII-H2 H2-T18/(71NS)SnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	FVB/NJ	JF1/MsJ	MOLF/EiJ	NZB/BlNJ	NZO/HlLtJ	PWK/PhJ
rs247083365					SNP	A	A	A	A	A	A	A	A	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss375352579	MGP_WTSI_8_84905912	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:83108642 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Il15	interleukin 15			Intron
				Noncoding-Transcript-Variant
Rr666117	regulatory region 666117			1342 bp proximal
Tssr81959	transcription start site region 81959			1917 bp upstream
Tssr81960	transcription start site region 81960			1730 bp upstream
Tssr81961	transcription start site region 81961			1692 bp upstream