rs247115714 SNP Detail

Summary

• ID
  rs247115714
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:128614780 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATATATTGAA ACAAAAATCT
  CTCTTGTGAA CCCCAAGTTC ACAAGTTTGA CTAATTCTCT AGCCAGCCTG CTCCAGGAAC
  CCCCTGTTTC CACCTCCCAA GTGCTGGGAT TATAGGTGGG CTGCTACACC CACCCCGCCC
  CTGGCATTAT GTAAGCACCA GGGATCCAAA CTCTGATTCT CATATTTACA CAGTAAACAA
  Y
  CCTCCCCCCA ATCTCCTTGC TGGGCTTCCC AACTACAAGA CATCCTGAGT TTTAAAACAA
  TTTTTCCAAT GATTTCCACT AAGATTTAGA GCTGGAAGAC ATATATGACC TCCTAGACTA
  GATCTCTGCT GCACTGAAGC CCTGAAAGGA AGCAGCGGTT GTCTCCGGTC TCATAGCAGC
  AGGTGGTGGA GCAGTCATCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321306924	CHEV_4_128398231	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247115714					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:128614780 () rs orientation: forward

Symbol	Name	Function Class
Gm33712	predicted gene, 33712	388 bp downstream
Phc2	polyhomeotic 2	within coordinates
Rr600012	regulatory region 600012	393 bp distal
Rr600013	regulatory region 600013	94 bp proximal
Tssr39071	transcription start site region 39071	1194 bp upstream