rs247123184 SNP Detail

Summary

• ID
  rs247123184
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:134273775 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCCTACCTC CACTCTAGGC
  CCACACCCAG GTTTGGAGGA TTTTTCCCTG CGTTGTGAAC ACTGGAGCTG AGCTCCACCT
  GTGCTTGGCC GACCTTTCAG AGGCCCATGG CAGAGCTGGG AAGGGCTGTT AGAGTCCCAT
  CTATTTAATT TGGGATGAGG GTCCTACTTA GGATGGCTTC AGGGTGTGGG AGGTTTTCTC
  Y
  TGGGGTTGCC CAGGACTGTT GAAAGAACAG CTAGAAGAGT GGCAGGGGCA AGCAGAAAGC
  CAGATAGTCG GGGTGCAGTT GAGGAAGGAG GGCCCTGCAG AGGACTCCCG GGTAGTGGAG
  AAACTTGCCC CCTGTGCTTT ACCCTTGTAG CATAGTAATG GGAGCTGCTG GGTTTGAACC
  CTGGCAACAG TGGGTTCACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322457604	CHEV_7_141863729	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247123184					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:134273775 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cpgi19845	CpG island 19845			369 bp distal
Dock1	dedicator of cytokinesis 1			Intron
				Noncoding-Transcript-Variant
Rr656984	regulatory region 656984			1349 bp distal
Rr656985	regulatory region 656985			within coordinates
Rr656986	regulatory region 656986			1933 bp proximal
Tssr69616	transcription start site region 69616			1385 bp downstream
Tssr69617	transcription start site region 69617			1331 bp downstream