rs247125827 SNP Detail

Summary

• ID
  rs247125827
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13258804 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAACCACAT GGTGGCTCAC
  AACCATCTAT AATGGGATCT GATGCCTTCT TCTGGTTCTG GTGTGTTTGA AAATAGCTAC
  AGTATACTCA TGTACATAAA ATAAATAATT CAGAGAGAGA GAGAGAGAGA GAGAATTGAA
  GGAGCAGGGT ACAGGCTTTG ACTGCCACCT TCTGGGTGTG AGCAGCCAGC CTTGGCAGTG
  Y
  CTGTTTAGAC ACAGGAACAG TGGGACCATC TAGGGACAAC AGTGCCTCTG GCTTTCTTGC
  CCTGCTGCAG AACAGTGACT AAGCACATTT GGAGACTGTG GTCCCTGTAA GGAAATGCTA
  CTTCTGAGAT ACCTAAATAT GAAAACTAAT AGGTTGCAGT ATTTATCAGC CTTGGAAATG
  AGACACTGAG AAAGGCTTGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322505103	CHEV_8_13208804	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247125827					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13258804 () rs orientation: forward

Symbol	Name	Function Class
Gm63815	predicted gene, 63815	1629 bp downstream
Rr381722	regulatory region 381722	within coordinates
Rr659882	regulatory region 659882	within coordinates
Rr659883	regulatory region 659883	141 bp distal
Rr659884	regulatory region 659884	21 bp distal
Rr659885	regulatory region 659885	716 bp proximal