rs247135758 SNP Detail

Summary

• ID
  rs247135758
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:134270639 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTCATGGA TTTCCAAAAT
  CCCAGGAAGA CCTAGAAAGC CCTTCTATCC AGGAGCATCT CCGTGGGTCA CGTCTAAATA
  AGCCTTACTG GTTTCTTCCT TCCTTTAAAA ACCAGCATTT CTTTCCACCC CAGGCCCCTT
  GCACATCCAC TTAATTCCCC ACTTCCCCTT ACTCATTTCT GCTTATCCTT AAAGTCCAGG
  M
  TTAAGACAGT TTTCTCAGGG AAACTCTTTT GACCTAAAGT GGGCCAGGCA CTTGACTCTG
  AGCACCCCAC TTCTGGTTAG CACCTTTGGT TGCTTCTCTT TGGAGCAGGT GAGTTACTGG
  ACCCCACCCT CAAGGCCTGA ACCCTTGAGG TTTCGGATTT TAGTGAATGC TGGAGGCCAC
  GTGGGAGGTG AGCCCTGGCA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322457587	CHEV_7_141860593	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247135758					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:134270639 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19845	CpG island 19845	1063 bp proximal
Dock1	dedicator of cytokinesis 1	1777 bp upstream
Rr656983	regulatory region 656983	688 bp proximal
Rr656984	regulatory region 656984	1287 bp proximal
Rr656985	regulatory region 656985	1788 bp proximal
Tssr69615	transcription start site region 69615	782 bp upstream
Tssr69616	transcription start site region 69616	1740 bp upstream
Tssr69617	transcription start site region 69617	1757 bp upstream