rs247243953 SNP Detail

Summary

• ID
  rs247243953
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:23735430 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTGCTGTT AGTGTAACCT
  AACCCAAATC ACTAGATGCT AGGACTTAAC TTGTTACATG TTTTTGGTGT GCTTATAATC
  ATTTAAAAGT AAAAATTTGT CTTGCTCTTC AAAAATAGCA GATACTCAGC TTTTGAAATG
  AAGTAGTACT TGATAATTTT TTATTAAAAT TTATTGTGGA ACAAGGAGCA GATATGAAAG
  Y
  TGCAGGAGAG AACCTCCATT CATAGAGTGT CTGGCTCTGG ATAACAGCAG GTACTACTAG
  CTTCAATCAA TTTTAAATGT CGTTCTTTAA ATGTTAATTC TTTCATTCAT CCATTCACTT
  TACATACTTA TAACCATTTA CACATCCTCC TCTCCTACTC CTTTCCTATT TTCCCCTCTT
  TCCCATCCAC TATTCCTTCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	CAST/EiJ
ss397836692	MGP_WTSI_17_23653423	EVA_MGPV3	EVA_MGPV3	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	CAST/EiJ
rs247243953					SNP	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss397836692	MGP_WTSI_17_23653423	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:23735430 () rs orientation: forward

Symbol	Name	Function Class
Gm7898	predicted gene 7898	672 bp downstream
Rr329666	regulatory region 329666	630 bp distal