rs247271229 SNP Detail

Summary

• ID
  rs247271229
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:101206560 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAATAGAGCA GCAATGAACA
  CGGATGTGCA AATATCACTG TGGTAGGTTA CAGAGTTCTC TGGGTACATT CCAGGAACGG
  GCTAGCTGTG CCCTGTGGTC ATTCTATTTT TATTTCTTGC ATGTAACACT GACTCTTACA
  AAGGAGATCC AATGCCAGCC TTCTTCCCTT AATTATTTGC CATGATTGCT TTTCCTCCAG
  M
  CAACATAATC ATGGTGACTA TCTTAGCCTA ATCGCCTAAT CCCAAGGCCA ATGCACTGTA
  TTGTACAGAT GATTTCAGGA GGAAAGATGA GCTTGAACAA ATGAGCTTCC TAGGCAGTCT
  CCAAACTTCA CATTAATTAA TCATTTCAGC CCTCTTCCTC GGTAAACTTG TAACCAGAGC
  AGGTAACAGT GAGCAAACGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323149616	CHEV_9_101231691	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247271229					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:101206560 () rs orientation: forward

Symbol	Name	Function Class
Rr198413	regulatory region 198413	within coordinates
Rr206996	regulatory region 206996	1961 bp distal