rs247278128 SNP Detail

Summary

• ID
  rs247278128
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:32420464 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGCTAGGGG TTTCTCCTTG
  GATAACATGA CACGAATTTT CCATATTACC GGCAGAGTAT GGTTTCGCAG CATCAAGTAC
  TTTCACATTG TGTGTGGTTA TTGTGTAAAC CATAAACTAA AATGCCAAGA TCTAAATATG
  GTGAGCCTCA ACTCAGCCTA ATAGACTGCC TATTTACACG GGAATGCAAG GCTATGACTG
  R
  AGCATGCGCC AACAACCAGG TACGGGCGGG CTTCGCGAAT TCGAGGACTG TTCAGCAGAC
  TAGACCAGTG TGCACCCGCC ATCGGGAAGA GTAATCCACC GCACAGATGA GTTCAGTGCA
  CGTGCTGTAT ATGTGAAAAT ACCAAATGGC TTCATTGTTT TAAAAGCAGC GGGGTAGAAA
  CGCATTTCTC AGCCCTTTGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320697911	CHEV_3_32265237	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247278128					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:32420464 () rs orientation: forward

Symbol	Name	Function Class
4930429B21Rik	RIKEN cDNA 4930429B21 gene	within coordinates
Cpgi13055	CpG island 13055	within coordinates
Rr77496	regulatory region 77496	within coordinates
Rr374783	regulatory region 374783	379 bp downstream
Tssr28742	transcription start site region 28742	1911 bp downstream
Tssr28743	transcription start site region 28743	1387 bp downstream
Tssr28744	transcription start site region 28744	989 bp downstream
Tssr28745	transcription start site region 28745	962 bp downstream
Tssr32923	transcription start site region 32923	1160 bp upstream
Tssr32924	transcription start site region 32924	1097 bp upstream
Tssr32925	transcription start site region 32925	889 bp upstream
Tssr32926	transcription start site region 32926	693 bp upstream
Tssr32927	transcription start site region 32927	624 bp upstream
Tssr32928	transcription start site region 32928	402 bp upstream
Zmat3	zinc finger matrin type 3	650 bp upstream