rs247300063 SNP Detail

Summary

• ID
  rs247300063
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:99099652 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGTAAGAGGA ATGTATTGTT CCAACGCATT GGGATTGTCC
  TATACCTCAA GGAGAGATGG TGAGCACTCA CCCACCCCCA ATCCCCCCAC ACTCACCCCC
  Y
  CCCCCCCCCC GCTGCTGATT TGGGCATTCT TTATACAGGT TTTTAGAGCA GCAGCCATTA
  GGCACAATGT GATTGGCAGA ACAGTGTGAC TTTTAAACT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cJ	C3H/HeJ	C57BL/6J	C57BL/10SnJ	CZECHII/EiJ	JF1/MsJ	MA/MyJ	NON/ShiLtJ	PL/J	QSi3/Ianm	QSi5/Ianm	SJL/J
ss375734081	MGP_WTSI_8_100896920	EVA_MGPV3	EVA_MGPV3	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cJ	C3H/HeJ	C57BL/6J	C57BL/10SnJ	CZECHII/EiJ	JF1/MsJ	MA/MyJ	NON/ShiLtJ	PL/J	QSi3/Ianm	QSi5/Ianm	SJL/J
rs247300063					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss375734081	MGP_WTSI_8_100896920	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:99099652 () rs orientation: forward

Symbol	Name	Function Class
Rr382525	regulatory region 382525	within coordinates
Rr668405	regulatory region 668405	64 bp proximal