rs247307058 SNP Detail

Summary

• ID
  rs247307058
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:124153835 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAGCGGCAA TTCCGCCCAT
  AGTGAGTCCT CCTAATAGTA GGGCCAGAGT TAGTGAGACG GGTTCTCTTT TATATTTGGC
  TCGTCTTTCA AATTGGTGGT AAACATAACT AGGGGAATGG TAGGTCACCC TTGGCCAAAG
  CTCGACCAGG ACACAGTAAT CGGTGGTGAG GTCAAGTATG GTGGTTGAGA TACAGGGAGT
  R
  AGTCCAGTAC TACAAGCCCA GGTAGTTCCT GTGGGAGCGG CCAAATAGTA GGACCCATCG
  CTTGTCTTTT GGGTGGTATT ACACAAGACT TGATGGGTTT TAGGGACCGC TCCTATGCAG
  AGTCCCTGTC CGGTCACTTC GGACAAGGTC AATTTGTGTT GAGAGGCCAC AGAGCAGTTA
  GCTGGGGCAG AAGTATGGTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322855350	CHEV_8_125950996	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247307058					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:124153835 () rs orientation: forward

Symbol	Name	Function Class
Mela	melanoma antigen	within coordinates
Tssr2728	transcription start site region 2728	377 bp downstream
Tssr79965	transcription start site region 79965	1314 bp upstream
Tssr83353	transcription start site region 83353	357 bp upstream
Tssr83354	transcription start site region 83354	462 bp downstream
Tssr83355	transcription start site region 83355	549 bp downstream
Tssr83356	transcription start site region 83356	626 bp downstream
Tssr83357	transcription start site region 83357	741 bp downstream
Tssr83358	transcription start site region 83358	1006 bp downstream
Tssr83359	transcription start site region 83359	1869 bp downstream
Tssr83360	transcription start site region 83360	1976 bp downstream