rs247344670 SNP Detail

Summary

• ID
  rs247344670
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:134942391 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAGTGACAC ATTTCATTAT
  ATGCTTTCTT CTCTCCTCCC TTTGAATTTT GAATCCTGAG AATATTATTT CTCATTTAAG
  TACAAAATAA TTTGAACACT TGATATAAAG ATGTGTGGTT CTAGAAAAGT TGAATGCAAA
  GCTTTCATTC ACCCATCTAA TGCCTAAAAT ACTCGACTGG TGGTTTACAA TGGAAAAAAA
  R
  AAAGTGTGGC TGGTGTTGAC ACTTCTTCTG CTTGTCATCA GCAGTGACTC AGTGTGGCAT
  GTTTGGAGTC TCTCGGGTTG AAGCAAAGAT GTTGGGAGAG TCAAGGGTTA TATAGATTCT
  ACTTGAAATG TGCTTTTGTT AGATGAGTTT CACAGTATTT TAAATATATA TATATGAATT
  TCTCAATCTA GCTACCGTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320515722	CHEV_2_134926207	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247344670					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:134942391 () rs orientation: forward

Symbol	Name	Function Class
Plcb1	phospholipase C, beta 1	Intron
Rr565720	regulatory region 565720	906 bp proximal
Rr565721	regulatory region 565721	1478 bp proximal