rs247398835 SNP Detail

Summary

• ID
  rs247398835
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:97450497 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATAAATATGT ATATCTTATA
  TGTATTTACA TATAATTATA TGTAAAATGT ATAACTTATT TTTACAAACT TACAAGTGTA
  GAGTTCTTAT TGTGCTTTTA TTTCTTGAGA TTTGTATATG TATGAGTATG TGTGTATGCA
  TGCATGCTTT TTGGGGATGT ATGCATGCAT ATGTGTGTAT GTACTTATGG GGCCAATGGC
  R
  GGTGTCATCT ACCTTGGGTT TTGCAAGAGG GTTTCTCTCT GTCCTGGGAT TGTCAAGAAT
  GCTAGGCTGG CTGGTTGCCA GTGACCCTAG GCATACACAT ATATCTGCCT CTGCCTGTAC
  ATCACTAGGA TTACAAGTAG ATGAAACTAT GTCTGGATTT TTTTTTTTTA ATGTAAGTTT
  GGGAGATCAA ACTCTGGCCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321620829	CHEV_5_97731657	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247398835					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:97450497 () rs orientation: forward

Symbol	Name	Function Class
Gm72500	predicted gene, 72500	within coordinates
Rr615043	regulatory region 615043	1839 bp distal
Rr615044	regulatory region 615044	1469 bp distal
Rr615045	regulatory region 615045	1311 bp distal