rs247423527 SNP Detail

Summary

• ID
  rs247423527
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:121575828 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGGAGACGT CCCGGGGCTG
  GAGGTGGCTC CGCTGCAGGT CTCTGGCTCT GGAAGCTCAG GTTCCTAGGC TTGGTAGCCA
  CCTCCACCTT TCACCTCCGC CACGCCCTCT GCGAGCCCCG GGAGCATCCC GCCGCCAGCC
  GGCTCGCCCG CCCCGCCGCG GGCACGCGCA CGCACGCAGC TGCGCACGCG CGTCCCCCTC
  R
  GAACCCGGAA GTGCGAGCGG AGCCACGTGG GTGGAGCTGG CGCGCAGGTC GCATGGGGGA
  GTCTATCCCG CTAGCCGCCC CGGTGCCGGT GGAACAGGCG GTGCTGGAGA CGTTCTTCTC
  TCACCTGGGT ATCTTCTCTT ACGACAAGGC CAAGGACAAT GTGGAGAAGG AACGAGAGGC
  CAACAAGAGC GCGGGGGGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323514842	CHEV_10_121176979	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247423527					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:121575828 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2295	CpG island 2295	within coordinates
Kics2	KICSTOR subunit 2	7 bp upstream
Rr440270	regulatory region 440270	within coordinates
Tssr96047	transcription start site region 96047	within coordinates
Tssr99640	transcription start site region 99640	388 bp downstream