rs247441023 SNP Detail

Summary

• ID
  rs247441023
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr11:87004800 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tcctcctca aaacaaaata aagatagaat
  taaaaaatct tgtcatagaa gctggagtat gtcacattgt gtcacacagt atatcctttt
  gtccatacaG AAGTCATCAC TTTTTGGTAA TAAGtttaat gcacatttta tgtaagtaaa
  M
  ctaaaaatgt aagtgtacac tgatgagttt tggcaaatgt atacataatg taactccctc
  cactactaag ataataaaac attttcatta catttcattt caaaagtctc tgtgtctgtc
  tgcagtctcc ttccaaacag tgcttttgtg                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323772692	CHEV_11_86927476	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247441023					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:87004800 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Mir301	microRNA 301			885 bp downstream
Ska2	spindle and kinetochore associated complex subunit 2			Intron
				Noncoding-Transcript-Variant
Tssr103909	transcription start site region 103909			894 bp downstream