rs247461621 SNP Detail

Summary

• ID
  rs247461621
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:81104128 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAAGGAAAG AGAGAGACGG
  GAGCCGCGGG CACCGCCGGC CAGCCGGCCG GCCGCTCGAG CTCTCCCGTG CGACGGCTGC
  GGAAAAAGGA AGTGTTGGCG TCCGGGCGCC CGTCCGCGCG GCCGGCTCCT GTCTGGACGT
  ATGTTCGAGG CCACCGAGAG TTGTGCAAGT GCAGCTCCGA GGCCCCGGCG GTCGCCCCCG
  R
  AGGGCCGCGG CGCCTTTAAG CCCAAAGGCC TGAGTCACGA GGAAGCTCCC TGCCCCTCCC
  CGCGCGCCCC ACACCGCTCC ACGAGGCCCA CGACCGCGGG CATGTGACCG GCGCCCCGCC
  CGGGACGCTA ACCCGGGCGG CGGTGAGGGG GCCCTGTGAA GTGGCGAGAC TGCGCGCGGA
  CCGTTAGCCG AGGCGGCCGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322285124	CHEV_7_88599266	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247461621					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:81104128 () rs orientation: forward

Symbol	Name	Function Class
Cpeb1	cytoplasmic polyadenylation element binding protein 1	within coordinates
Cpeb1os1	cytoplasmic polyadenylation element binding protein 1, opposite strand 1	1515 bp upstream
Cpgi19352	CpG island 19352	within coordinates
Tssr73332	transcription start site region 73332	371 bp downstream
Tssr73333	transcription start site region 73333	1006 bp downstream
Tssr73334	transcription start site region 73334	1061 bp downstream
Tssr73335	transcription start site region 73335	1109 bp downstream