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rs247463700 SNP Detail
Summary
  • ID
    rs247463700
  • Variation Type
    SNP
  • Alleles
    C/G
Genome Location and Flanking Sequence
  • Location
    Chr15:83182326 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                      GTGCGAGGC ATGAATGAGg tgtgtgtgtg
    aaatgcacac gttgcaggca gaaggggcat gcaatgcttt gcagttggag ttgtcagcca
    actaatgtgg gtgctgagaa cagaactcag gccctctcca agagcagcaa gagcgcttaa
    S
    agcagagccg tctctctagc ccTCCCAGGG TTACTTTAAA ACACTGCATC TTAACCAAGA
    GTTCTGGAGA AAATGCTGCT TGCCAAAGCC ACTCTCCAGG GCTTCTCTGC CAGCCCTCTC
    TGCACAAAGG CTCCAGGAGA GGTAACCTGG                                 
    
    S = C/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
LG/J
SM/J
ss325036144 CHEV_15_83128555 CHEVERUD SCREENING_POP f SNP C G
SNP Consensus Information
SNP Consensus Type
LG/J
SM/J
rs247463700 SNP C G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr15:83182326 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Arfgap3 ARF GTPase activating protein 3 1614 bp downstream
Gm32788 predicted gene, 32788 1335 bp upstream
Rr304705 regulatory region 304705 75 bp proximal
Rr310865 regulatory region 310865 257 bp proximal
Rr314786 regulatory region 314786 727 bp distal
Rr314787 regulatory region 314787 675 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory